Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 KLF2P2-201ENST00000416807 1039 ntBASIC16.3■□□□□ 0.2
TPGS2Q68CL5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 AC004066.1-201ENST00000502488 802 ntBASIC16.3■□□□□ 0.2
TPGS2Q68CL5 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 MIR4538-201ENST00000581377 78 ntBASIC16.3■□□□□ 0.2
TPGS2Q68CL5 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 MIR6869-201ENST00000619434 62 ntBASIC16.3■□□□□ 0.2
TPGS2Q68CL5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPGS2Q68CL5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 CD8B2-202ENST00000417670 633 ntBASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 FAM8A2P-201ENST00000528813 1142 ntBASIC16.29■□□□□ 0.2
TPGS2Q68CL5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AC084364.1-201ENST00000551967 1556 ntBASIC16.29■□□□□ 0.2
TPGS2Q68CL5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.29■□□□□ 0.2
TPGS2Q68CL5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 RNU1-114P-201ENST00000365297 166 ntBASIC16.28■□□□□ 0.2
TPGS2Q68CL5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TPGS2Q68CL5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms