Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AC245100.5-201ENST00000452108 331 ntBASIC12.57□□□□□ -0.4
FAM78BQ5VT40 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AL365330.1-201ENST00000607459 531 ntBASIC12.57□□□□□ -0.4
FAM78BQ5VT40 MIR1199-201ENST00000621445 119 ntBASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AL691432.3-201ENST00000621860 400 ntBASIC12.57□□□□□ -0.4
FAM78BQ5VT40 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.57□□□□□ -0.4
FAM78BQ5VT40 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 C18orf15-201ENST00000623680 2534 ntBASIC12.56□□□□□ -0.4
FAM78BQ5VT40 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FAM78BQ5VT40 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms