Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 HCG4B-203ENST00000450128 991 ntBASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 RNA5SP419-201ENST00000515908 135 ntBASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SH2D4BQ5SQS7 PMS2P7-201ENST00000506558 1336 ntBASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 AC023908.3-201ENST00000564211 3047 ntBASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 AC009947.1-201ENST00000444350 727 ntBASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 UNC93B6-202ENST00000528242 690 ntBASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 AC096734.2-201ENST00000562054 433 ntBASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 AC002347.1-201ENST00000569543 541 ntBASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SH2D4BQ5SQS7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 AC026396.1-201ENST00000419388 421 ntBASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 RNA5SP415-201ENST00000517246 115 ntBASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SH2D4BQ5SQS7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.67■□□□□ 0.1
SH2D4BQ5SQS7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms