Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 TOMM22P5-201ENST00000416399 439 ntBASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN20Q4JDL3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN20Q4JDL3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 AC135586.1-201ENST00000539323 574 ntBASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 KRT8P44-201ENST00000441609 1350 ntBASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN20Q4JDL3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AL121723.1-201ENST00000445194 1519 ntBASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AC006486.2-201ENST00000624246 2199 ntBASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 UGT1A2P-201ENST00000454886 866 ntBASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AL512638.1-201ENST00000457493 794 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms