Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40BQ12829 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40BQ12829 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40BQ12829 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40BQ12829 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40BQ12829 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40BQ12829 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40BQ12829 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40BQ12829 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB40BQ12829 PHKG1P2-201ENST00000457537 863 ntBASIC14.11□□□□□ -0.15
RAB40BQ12829 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB40BQ12829 UNC93B6-202ENST00000528242 690 ntBASIC14.11□□□□□ -0.15
RAB40BQ12829 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.11□□□□□ -0.15
RAB40BQ12829 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB40BQ12829 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 SPTSSB-204ENST00000617024 1292 ntBASIC14.11□□□□□ -0.15
RAB40BQ12829 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40BQ12829 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
RAB40BQ12829 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB40BQ12829 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40BQ12829 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB40BQ12829 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40BQ12829 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 KRT8P37-201ENST00000451609 1420 ntBASIC14.1□□□□□ -0.15
RAB40BQ12829 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB40BQ12829 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40BQ12829 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40BQ12829 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB40BQ12829 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 IFNL4P1-201ENST00000607083 540 ntBASIC14.1□□□□□ -0.15
RAB40BQ12829 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB40BQ12829 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40BQ12829 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40BQ12829 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms