Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 AC009486.1-201ENST00000569860 813 ntBASIC21.19■□□□□ 0.98
CGNL1Q0VF96 AC133552.6-201ENST00000613406 534 ntBASIC21.19■□□□□ 0.98
CGNL1Q0VF96 AL033527.4-201ENST00000641026 673 ntBASIC21.19■□□□□ 0.98
CGNL1Q0VF96 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.19■□□□□ 0.98
CGNL1Q0VF96 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 AC018665.1-201ENST00000622927 1362 ntBASIC21.18■□□□□ 0.98
CGNL1Q0VF96 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 AC007950.2-201ENST00000615045 2347 ntBASIC21.18■□□□□ 0.98
CGNL1Q0VF96 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 AC084364.1-201ENST00000551967 1556 ntBASIC21.18■□□□□ 0.98
CGNL1Q0VF96 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 SLC25A47P1-201ENST00000531577 414 ntBASIC21.18■□□□□ 0.98
CGNL1Q0VF96 PTP4A1P2-201ENST00000546033 454 ntBASIC21.18■□□□□ 0.98
CGNL1Q0VF96 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.18■□□□□ 0.98
CGNL1Q0VF96 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CGNL1Q0VF96 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 CICP13-201ENST00000422015 2789 ntBASIC21.17■□□□□ 0.98
CGNL1Q0VF96 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 KRT43P-201ENST00000434019 910 ntBASIC21.17■□□□□ 0.98
CGNL1Q0VF96 AC092658.1-201ENST00000505836 891 ntBASIC21.17■□□□□ 0.98
CGNL1Q0VF96 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 SNX29P1-201ENST00000548357 1007 ntBASIC21.17■□□□□ 0.98
CGNL1Q0VF96 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 MIR6775-201ENST00000617557 69 ntBASIC21.17■□□□□ 0.98
CGNL1Q0VF96 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CGNL1Q0VF96 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CGNL1Q0VF96 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms