Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP1P78357 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP1P78357 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CNTNAP1P78357 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.43■□□□□ 0.54
CNTNAP1P78357 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.43■□□□□ 0.54
CNTNAP1P78357 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP1P78357 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 NOC2LP1-201ENST00000450578 752 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 AC026471.1-201ENST00000564629 3026 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 HCG11-201ENST00000411553 5696 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 ACTBP8-201ENST00000403258 1108 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 FGFR3P1-201ENST00000449999 601 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 AL161670.2-201ENST00000557650 1227 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP1P78357 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 BX539320.1-201ENST00000623759 877 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 AC100757.4-201ENST00000626934 759 ntBASIC18.42■□□□□ 0.54
CNTNAP1P78357 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNTNAP1P78357 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.41■□□□□ 0.54
CNTNAP1P78357 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 CTBP2P4-201ENST00000513884 920 ntBASIC18.41■□□□□ 0.54
CNTNAP1P78357 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 AP001065.2-201ENST00000617205 644 ntBASIC18.41■□□□□ 0.54
CNTNAP1P78357 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP1P78357 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP1P78357 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 AL354989.2-201ENST00000435838 1540 ntBASIC18.4■□□□□ 0.54
CNTNAP1P78357 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 AC092364.2-201ENST00000596710 2692 ntBASIC18.4■□□□□ 0.54
CNTNAP1P78357 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms