Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.7■□□□□ 0.42
TPM4P67936 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.7■□□□□ 0.42
TPM4P67936 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TPM4P67936 IFNL4P1-201ENST00000607083 540 ntBASIC17.7■□□□□ 0.42
TPM4P67936 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TPM4P67936 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.7■□□□□ 0.42
TPM4P67936 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 AC009090.5-201ENST00000624886 2285 ntBASIC17.7■□□□□ 0.42
TPM4P67936 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TPM4P67936 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.7■□□□□ 0.42
TPM4P67936 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TPM4P67936 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TPM4P67936 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM4P67936 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM4P67936 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 AC087386.2-201ENST00000623212 4637 ntBASIC17.69■□□□□ 0.42
TPM4P67936 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM4P67936 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 HNRNPDP1-201ENST00000439535 754 ntBASIC17.69■□□□□ 0.42
TPM4P67936 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.69■□□□□ 0.42
TPM4P67936 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM4P67936 AC005089.1-201ENST00000619486 2241 ntBASIC17.69■□□□□ 0.42
TPM4P67936 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM4P67936 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM4P67936 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM4P67936 REXO1L1P-202ENST00000608646 1974 ntBASIC17.69■□□□□ 0.42
TPM4P67936 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.69■□□□□ 0.42
TPM4P67936 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TPM4P67936 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.69■□□□□ 0.42
TPM4P67936 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM4P67936 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM4P67936 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TPM4P67936 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM4P67936 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM4P67936 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 KRT18P67-201ENST00000432816 1264 ntBASIC17.68■□□□□ 0.42
TPM4P67936 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 AC092910.1-201ENST00000482027 1129 ntBASIC17.68■□□□□ 0.42
TPM4P67936 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM4P67936 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 AC096734.2-201ENST00000562054 433 ntBASIC17.68■□□□□ 0.42
TPM4P67936 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM4P67936 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 AL691432.1-201ENST00000596308 1422 ntBASIC17.68■□□□□ 0.42
TPM4P67936 AC023141.13-201ENST00000604991 943 ntBASIC17.68■□□□□ 0.42
TPM4P67936 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 AL161645.1-201ENST00000622716 1255 ntBASIC17.68■□□□□ 0.42
TPM4P67936 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM4P67936 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM4P67936 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM4P67936 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms