Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.32■□□□□ 0.04
AP1S2P56377 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S2P56377 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.32■□□□□ 0.04
AP1S2P56377 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
AP1S2P56377 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.32■□□□□ 0.04
AP1S2P56377 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP1S2P56377 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
AP1S2P56377 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
AP1S2P56377 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S2P56377 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
AP1S2P56377 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
AP1S2P56377 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
AP1S2P56377 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.31■□□□□ 0.04
AP1S2P56377 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.31■□□□□ 0.04
AP1S2P56377 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 AC074338.1-201ENST00000416825 156 ntBASIC15.31■□□□□ 0.04
AP1S2P56377 AC092580.3-201ENST00000430932 139 ntBASIC15.31■□□□□ 0.04
AP1S2P56377 AC097493.3-201ENST00000509725 367 ntBASIC15.31■□□□□ 0.04
AP1S2P56377 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.31■□□□□ 0.04
AP1S2P56377 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.31■□□□□ 0.04
AP1S2P56377 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.31■□□□□ 0.04
AP1S2P56377 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.31■□□□□ 0.04
AP1S2P56377 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.31■□□□□ 0.04
AP1S2P56377 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.31■□□□□ 0.04
AP1S2P56377 C8orf49-201ENST00000525043 1968 ntBASIC15.31■□□□□ 0.04
AP1S2P56377 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.31■□□□□ 0.04
AP1S2P56377 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.31■□□□□ 0.04
AP1S2P56377 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 AC013268.4-201ENST00000637413 2228 ntBASIC15.31■□□□□ 0.04
AP1S2P56377 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP1S2P56377 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP1S2P56377 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S2P56377 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 MIR943-201ENST00000401286 94 ntBASIC15.3■□□□□ 0.04
AP1S2P56377 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S2P56377 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 AC015922.1-201ENST00000421102 1152 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms