Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LINC02560-201ENST00000596379 459 ntBASIC11.71□□□□□ -0.53
CMC4P56277 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CMC4P56277 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 AC008738.7-201ENST00000609744 511 ntBASIC11.71□□□□□ -0.53
CMC4P56277 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 AC008761.3-201ENST00000624803 892 ntBASIC11.71□□□□□ -0.53
CMC4P56277 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.71□□□□□ -0.53
CMC4P56277 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.71□□□□□ -0.53
CMC4P56277 AL358472.5-202ENST00000641448 1267 ntBASIC11.71□□□□□ -0.53
CMC4P56277 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.71□□□□□ -0.53
CMC4P56277 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.71□□□□□ -0.54
CMC4P56277 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC11.71□□□□□ -0.54
CMC4P56277 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CMC4P56277 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CMC4P56277 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
CMC4P56277 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.71□□□□□ -0.54
CMC4P56277 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CMC4P56277 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.71□□□□□ -0.54
CMC4P56277 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CMC4P56277 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.7□□□□□ -0.54
CMC4P56277 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.7□□□□□ -0.54
CMC4P56277 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CMC4P56277 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CMC4P56277 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CMC4P56277 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CMC4P56277 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.7□□□□□ -0.54
CMC4P56277 SPDYE19P-201ENST00000338590 713 ntBASIC11.7□□□□□ -0.54
CMC4P56277 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.7□□□□□ -0.54
CMC4P56277 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.7□□□□□ -0.54
CMC4P56277 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.7□□□□□ -0.54
CMC4P56277 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.7□□□□□ -0.54
CMC4P56277 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.7□□□□□ -0.54
CMC4P56277 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.7□□□□□ -0.54
CMC4P56277 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.7□□□□□ -0.54
CMC4P56277 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.7□□□□□ -0.54
CMC4P56277 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 AL365203.3-201ENST00000609742 2057 ntBASIC11.7□□□□□ -0.54
CMC4P56277 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.7□□□□□ -0.54
CMC4P56277 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.7□□□□□ -0.54
CMC4P56277 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CMC4P56277 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CMC4P56277 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms