Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC055876.2-201ENST00000531834 546 ntBASIC16.68■□□□□ 0.26
CACNA2D1P54289 AL596325.1-201ENST00000563991 1082 ntBASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC007431.3-201ENST00000623221 587 ntBASIC16.68■□□□□ 0.26
CACNA2D1P54289 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC092384.3-202ENST00000564646 2873 ntBASIC16.68■□□□□ 0.26
CACNA2D1P54289 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CACNA2D1P54289 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CACNA2D1P54289 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 CLK3P2-201ENST00000427566 1453 ntBASIC16.67■□□□□ 0.26
CACNA2D1P54289 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 RN7SL692P-201ENST00000464677 288 ntBASIC16.67■□□□□ 0.26
CACNA2D1P54289 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 SLED1-202ENST00000512051 380 ntBASIC16.67■□□□□ 0.26
CACNA2D1P54289 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 AC005225.4-201ENST00000557330 545 ntBASIC16.67■□□□□ 0.26
CACNA2D1P54289 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 AC012645.4-201ENST00000610691 1061 ntBASIC16.67■□□□□ 0.26
CACNA2D1P54289 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CACNA2D1P54289 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.67■□□□□ 0.26
CACNA2D1P54289 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 CTBP2P3-201ENST00000585629 1255 ntBASIC16.66■□□□□ 0.26
CACNA2D1P54289 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms