Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 PRAL-201ENST00000624952 3286 ntBASIC14.68□□□□□ -0.06
EFNA3P52797 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
EFNA3P52797 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.68□□□□□ -0.06
EFNA3P52797 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
EFNA3P52797 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
EFNA3P52797 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.68□□□□□ -0.06
EFNA3P52797 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.68□□□□□ -0.06
EFNA3P52797 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
EFNA3P52797 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.68□□□□□ -0.06
EFNA3P52797 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.68□□□□□ -0.06
EFNA3P52797 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
EFNA3P52797 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.68□□□□□ -0.06
EFNA3P52797 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
EFNA3P52797 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
EFNA3P52797 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
EFNA3P52797 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
EFNA3P52797 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 AP005117.1-202ENST00000581724 1908 ntBASIC14.67□□□□□ -0.06
EFNA3P52797 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
EFNA3P52797 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 AL512384.1-201ENST00000406683 331 ntBASIC14.67□□□□□ -0.06
EFNA3P52797 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.67□□□□□ -0.06
EFNA3P52797 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.67□□□□□ -0.06
EFNA3P52797 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 AL359711.2-201ENST00000563105 872 ntBASIC14.67□□□□□ -0.06
EFNA3P52797 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
EFNA3P52797 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms