Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC6A12P48065 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC6A12P48065 AC055876.3-201ENST00000431496 288 ntBASIC15.14■□□□□ 0.01
SLC6A12P48065 AC114501.2-201ENST00000439631 535 ntBASIC15.14■□□□□ 0.01
SLC6A12P48065 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC6A12P48065 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 AC138649.4-201ENST00000612222 287 ntBASIC15.14■□□□□ 0.01
SLC6A12P48065 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.14■□□□□ 0.01
SLC6A12P48065 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SLC6A12P48065 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC6A12P48065 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC6A12P48065 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SLC6A12P48065 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SLC6A12P48065 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC6A12P48065 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 AL121723.1-201ENST00000445194 1519 ntBASIC15.13■□□□□ 0.01
SLC6A12P48065 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SLC6A12P48065 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC6A12P48065 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC6A12P48065 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC6A12P48065 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC6A12P48065 KRT18P43-201ENST00000469825 1281 ntBASIC15.13■□□□□ 0.01
SLC6A12P48065 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.13■□□□□ 0.01
SLC6A12P48065 IGHV3-42-201ENST00000520410 361 ntBASIC15.13■□□□□ 0.01
SLC6A12P48065 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC6A12P48065 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC6A12P48065 AC092337.1-201ENST00000568699 1129 ntBASIC15.13■□□□□ 0.01
SLC6A12P48065 AC009407.1-201ENST00000568958 598 ntBASIC15.13■□□□□ 0.01
SLC6A12P48065 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC6A12P48065 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC6A12P48065 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SLC6A12P48065 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC6A12P48065 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.13■□□□□ 0.01
SLC6A12P48065 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC6A12P48065 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A12P48065 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A12P48065 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC6A12P48065 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC6A12P48065 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC6A12P48065 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC6A12P48065 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A12P48065 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.12■□□□□ 0.01
SLC6A12P48065 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC6A12P48065 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC6A12P48065 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC6A12P48065 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms