Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.15■□□□□ 0.34
ABCD1P33897 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.15■□□□□ 0.34
ABCD1P33897 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.15■□□□□ 0.34
ABCD1P33897 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.15■□□□□ 0.34
ABCD1P33897 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.15■□□□□ 0.34
ABCD1P33897 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.15■□□□□ 0.34
ABCD1P33897 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.15■□□□□ 0.34
ABCD1P33897 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.15■□□□□ 0.34
ABCD1P33897 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.15■□□□□ 0.34
ABCD1P33897 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.15■□□□□ 0.34
ABCD1P33897 AC027307.3-201ENST00000594262 1100 ntBASIC17.15■□□□□ 0.34
ABCD1P33897 AC007541.1-201ENST00000570282 1469 ntBASIC17.15■□□□□ 0.34
ABCD1P33897 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.15■□□□□ 0.34
ABCD1P33897 AC087481.3-201ENST00000602886 1894 ntBASIC17.15■□□□□ 0.34
ABCD1P33897 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCD1P33897 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.14■□□□□ 0.34
ABCD1P33897 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ABCD1P33897 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD1P33897 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
ABCD1P33897 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD1P33897 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ABCD1P33897 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD1P33897 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCD1P33897 AL589987.1-201ENST00000453380 819 ntBASIC17.14■□□□□ 0.33
ABCD1P33897 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCD1P33897 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.14■□□□□ 0.33
ABCD1P33897 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD1P33897 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.14■□□□□ 0.33
ABCD1P33897 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
ABCD1P33897 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCD1P33897 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ABCD1P33897 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ABCD1P33897 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
ABCD1P33897 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD1P33897 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ABCD1P33897 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD1P33897 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD1P33897 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 AC090616.6-203ENST00000579186 1945 ntBASIC17.13■□□□□ 0.33
ABCD1P33897 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD1P33897 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD1P33897 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
ABCD1P33897 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.13■□□□□ 0.33
ABCD1P33897 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 AL442647.2-201ENST00000429864 857 ntBASIC17.13■□□□□ 0.33
ABCD1P33897 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.13■□□□□ 0.33
ABCD1P33897 FAM86LP-201ENST00000478302 853 ntBASIC17.13■□□□□ 0.33
ABCD1P33897 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCD1P33897 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCD1P33897 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCD1P33897 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
ABCD1P33897 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ABCD1P33897 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD1P33897 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD1P33897 CICP13-201ENST00000422015 2789 ntBASIC17.13■□□□□ 0.33
ABCD1P33897 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD1P33897 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ABCD1P33897 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD1P33897 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD1P33897 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms