Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.64□□□□□ -0.55
CKS2P33552 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.64□□□□□ -0.55
CKS2P33552 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 STRCP1-201ENST00000509801 5328 ntBASIC11.64□□□□□ -0.55
CKS2P33552 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.64□□□□□ -0.55
CKS2P33552 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.64□□□□□ -0.55
CKS2P33552 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CKS2P33552 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CKS2P33552 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.63□□□□□ -0.55
CKS2P33552 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
CKS2P33552 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 PTCHD3P3-201ENST00000403073 906 ntBASIC11.63□□□□□ -0.55
CKS2P33552 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
CKS2P33552 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 AC107918.2-201ENST00000530817 355 ntBASIC11.63□□□□□ -0.55
CKS2P33552 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 AC021097.1-201ENST00000607902 574 ntBASIC11.63□□□□□ -0.55
CKS2P33552 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.63□□□□□ -0.55
CKS2P33552 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CKS2P33552 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CKS2P33552 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.63□□□□□ -0.55
CKS2P33552 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms