Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCND1P24385 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.92■□□□□ 0.14
CCND1P24385 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCND1P24385 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCND1P24385 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.92■□□□□ 0.14
CCND1P24385 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCND1P24385 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCND1P24385 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCND1P24385 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCND1P24385 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CCND1P24385 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCND1P24385 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 MIR600HG-201ENST00000449175 5984 ntBASIC15.91■□□□□ 0.14
CCND1P24385 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 AC093724.1-201ENST00000448659 1027 ntBASIC15.91■□□□□ 0.14
CCND1P24385 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 PRYP6-201ENST00000514804 343 ntBASIC15.91■□□□□ 0.14
CCND1P24385 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.91■□□□□ 0.14
CCND1P24385 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.91■□□□□ 0.14
CCND1P24385 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCND1P24385 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 AC092902.6-201ENST00000641783 218 ntBASIC15.91■□□□□ 0.14
CCND1P24385 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.91■□□□□ 0.14
CCND1P24385 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CCND1P24385 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCND1P24385 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCND1P24385 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCND1P24385 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.91■□□□□ 0.14
CCND1P24385 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCND1P24385 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 PCDHA3-202ENST00000532566 4594 ntBASIC15.9■□□□□ 0.14
CCND1P24385 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCND1P24385 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 MIR648-201ENST00000385046 94 ntBASIC15.9■□□□□ 0.14
CCND1P24385 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 TFAMP1-201ENST00000412727 736 ntBASIC15.9■□□□□ 0.14
CCND1P24385 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 HTR5BP-201ENST00000430851 1154 ntBASIC15.9■□□□□ 0.14
CCND1P24385 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.9■□□□□ 0.14
CCND1P24385 AL135744.1-201ENST00000565098 629 ntBASIC15.9■□□□□ 0.14
CCND1P24385 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 MIR3687-2-201ENST00000577708 61 ntBASIC15.9■□□□□ 0.14
CCND1P24385 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.9■□□□□ 0.14
CCND1P24385 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.9■□□□□ 0.14
CCND1P24385 MIR3687-1-201ENST00000614492 61 ntBASIC15.9■□□□□ 0.14
CCND1P24385 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.9■□□□□ 0.14
CCND1P24385 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCND1P24385 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 AC073439.1-201ENST00000624121 1774 ntBASIC15.9■□□□□ 0.14
CCND1P24385 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CCND1P24385 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCND1P24385 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCND1P24385 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms