Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
XRCC1P18887 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
XRCC1P18887 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.73■□□□□ 0.11
XRCC1P18887 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
XRCC1P18887 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 MRPS18AP1-201ENST00000414458 589 ntBASIC15.73■□□□□ 0.11
XRCC1P18887 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.73■□□□□ 0.11
XRCC1P18887 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 AC245100.5-201ENST00000452108 331 ntBASIC15.73■□□□□ 0.11
XRCC1P18887 AC009477.1-201ENST00000452936 217 ntBASIC15.73■□□□□ 0.11
XRCC1P18887 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.73■□□□□ 0.11
XRCC1P18887 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.73■□□□□ 0.11
XRCC1P18887 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 RN7SL204P-201ENST00000582831 262 ntBASIC15.73■□□□□ 0.11
XRCC1P18887 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
XRCC1P18887 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.73■□□□□ 0.11
XRCC1P18887 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.73■□□□□ 0.11
XRCC1P18887 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
XRCC1P18887 SNX18-202ENST00000343017 3140 ntBASIC15.73■□□□□ 0.11
XRCC1P18887 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
XRCC1P18887 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
XRCC1P18887 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
XRCC1P18887 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 NORAD-201ENST00000565493 5339 ntBASIC15.72■□□□□ 0.11
XRCC1P18887 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.72■□□□□ 0.11
XRCC1P18887 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.72■□□□□ 0.11
XRCC1P18887 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.72■□□□□ 0.11
XRCC1P18887 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 AC002472.2-201ENST00000442739 958 ntBASIC15.72■□□□□ 0.11
XRCC1P18887 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 ZNF890P-202ENST00000530367 1156 ntBASIC15.72■□□□□ 0.11
XRCC1P18887 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 AL109954.1-202ENST00000564051 2148 ntBASIC15.72■□□□□ 0.11
XRCC1P18887 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.72■□□□□ 0.11
XRCC1P18887 AC138761.1-201ENST00000584393 385 ntBASIC15.72■□□□□ 0.11
XRCC1P18887 AL844908.2-201ENST00000609461 460 ntBASIC15.72■□□□□ 0.11
XRCC1P18887 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.72■□□□□ 0.11
XRCC1P18887 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.72■□□□□ 0.11
XRCC1P18887 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.72■□□□□ 0.11
XRCC1P18887 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.72■□□□□ 0.11
XRCC1P18887 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 CICP24-201ENST00000605464 2705 ntBASIC15.72■□□□□ 0.11
XRCC1P18887 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
XRCC1P18887 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
XRCC1P18887 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC1P18887 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC1P18887 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms