Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 AC009477.1-201ENST00000452936 217 ntBASIC14.19□□□□□ -0.14
PPP3CBP16298 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PPP3CBP16298 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.19□□□□□ -0.14
PPP3CBP16298 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.19□□□□□ -0.14
PPP3CBP16298 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.19□□□□□ -0.14
PPP3CBP16298 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.19□□□□□ -0.14
PPP3CBP16298 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.19□□□□□ -0.14
PPP3CBP16298 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.19□□□□□ -0.14
PPP3CBP16298 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.19□□□□□ -0.14
PPP3CBP16298 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 AC239800.4-201ENST00000603712 296 ntBASIC14.19□□□□□ -0.14
PPP3CBP16298 AF228730.6-201ENST00000641497 218 ntBASIC14.19□□□□□ -0.14
PPP3CBP16298 AC084121.3-201ENST00000641716 218 ntBASIC14.19□□□□□ -0.14
PPP3CBP16298 AC105233.6-201ENST00000642093 218 ntBASIC14.19□□□□□ -0.14
PPP3CBP16298 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.19□□□□□ -0.14
PPP3CBP16298 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.19□□□□□ -0.14
PPP3CBP16298 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PPP3CBP16298 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PPP3CBP16298 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 MRPS18AP1-201ENST00000414458 589 ntBASIC14.18□□□□□ -0.14
PPP3CBP16298 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.18□□□□□ -0.14
PPP3CBP16298 AC015922.1-201ENST00000421102 1152 ntBASIC14.18□□□□□ -0.14
PPP3CBP16298 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 AL139010.1-201ENST00000454878 894 ntBASIC14.18□□□□□ -0.14
PPP3CBP16298 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 RN7SL618P-201ENST00000477850 296 ntBASIC14.18□□□□□ -0.14
PPP3CBP16298 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.18□□□□□ -0.14
PPP3CBP16298 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.18□□□□□ -0.14
PPP3CBP16298 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 BANF1P1-201ENST00000553684 263 ntBASIC14.18□□□□□ -0.14
PPP3CBP16298 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PPP3CBP16298 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PPP3CBP16298 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.18□□□□□ -0.14
PPP3CBP16298 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.18□□□□□ -0.14
PPP3CBP16298 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PPP3CBP16298 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.18□□□□□ -0.14
PPP3CBP16298 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.18□□□□□ -0.14
PPP3CBP16298 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PPP3CBP16298 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PPP3CBP16298 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.17□□□□□ -0.14
PPP3CBP16298 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PPP3CBP16298 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PPP3CBP16298 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PPP3CBP16298 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PPP3CBP16298 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PPP3CBP16298 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PPP3CBP16298 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PPP3CBP16298 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms