Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RARAP10276 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
RARAP10276 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RARAP10276 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.52■□□□□ 0.24
RARAP10276 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 AL035456.1-201ENST00000456064 1369 ntBASIC16.52■□□□□ 0.24
RARAP10276 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RARAP10276 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.52■□□□□ 0.24
RARAP10276 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 SPDYE7P-202ENST00000420373 878 ntBASIC16.52■□□□□ 0.24
RARAP10276 HIST3H2BA-201ENST00000436555 524 ntBASIC16.52■□□□□ 0.24
RARAP10276 MTND6P24-201ENST00000440466 518 ntBASIC16.52■□□□□ 0.24
RARAP10276 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RARAP10276 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.52■□□□□ 0.24
RARAP10276 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.52■□□□□ 0.24
RARAP10276 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.52■□□□□ 0.24
RARAP10276 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.52■□□□□ 0.24
RARAP10276 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
RARAP10276 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.52■□□□□ 0.24
RARAP10276 LINC00628-201ENST00000628516 1289 ntBASIC16.52■□□□□ 0.24
RARAP10276 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.52■□□□□ 0.24
RARAP10276 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.52■□□□□ 0.24
RARAP10276 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RARAP10276 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RARAP10276 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RARAP10276 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RARAP10276 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
RARAP10276 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RARAP10276 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.52■□□□□ 0.23
RARAP10276 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.52■□□□□ 0.23
RARAP10276 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.52■□□□□ 0.23
RARAP10276 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RARAP10276 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RARAP10276 AC106881.1-201ENST00000605849 3329 ntBASIC16.52■□□□□ 0.23
RARAP10276 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.51■□□□□ 0.23
RARAP10276 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RARAP10276 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.51■□□□□ 0.23
RARAP10276 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 MIR1233-2-201ENST00000408138 82 ntBASIC16.51■□□□□ 0.23
RARAP10276 MIR1233-1-201ENST00000408722 82 ntBASIC16.51■□□□□ 0.23
RARAP10276 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.51■□□□□ 0.23
RARAP10276 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 HLA-J-203ENST00000494367 1087 ntBASIC16.51■□□□□ 0.23
RARAP10276 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 AC109322.1-201ENST00000524499 1264 ntBASIC16.51■□□□□ 0.23
RARAP10276 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
RARAP10276 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RARAP10276 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 AC023511.2-201ENST00000618803 211 ntBASIC16.51■□□□□ 0.23
RARAP10276 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RARAP10276 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.51■□□□□ 0.23
RARAP10276 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.51■□□□□ 0.23
RARAP10276 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RARAP10276 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.5■□□□□ 0.23
RARAP10276 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms