Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
FAM228BP0C875 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM228BP0C875 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM228BP0C875 NORAD-201ENST00000565493 5339 ntBASIC16.77■□□□□ 0.28
FAM228BP0C875 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
FAM228BP0C875 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
FAM228BP0C875 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
FAM228BP0C875 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 AJ011931.1-201ENST00000618749 2492 ntBASIC16.77■□□□□ 0.28
FAM228BP0C875 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.77■□□□□ 0.28
FAM228BP0C875 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 CICP11-201ENST00000434745 2827 ntBASIC16.77■□□□□ 0.28
FAM228BP0C875 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.77■□□□□ 0.28
FAM228BP0C875 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM228BP0C875 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 SPDYE17-201ENST00000412399 783 ntBASIC16.77■□□□□ 0.28
FAM228BP0C875 AC004461.1-201ENST00000412461 403 ntBASIC16.77■□□□□ 0.28
FAM228BP0C875 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.77■□□□□ 0.28
FAM228BP0C875 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.77■□□□□ 0.28
FAM228BP0C875 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM228BP0C875 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.77■□□□□ 0.28
FAM228BP0C875 AC005829.1-201ENST00000570002 483 ntBASIC16.77■□□□□ 0.28
FAM228BP0C875 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM228BP0C875 AL133215.2-201ENST00000609242 977 ntBASIC16.77■□□□□ 0.28
FAM228BP0C875 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM228BP0C875 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM228BP0C875 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM228BP0C875 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM228BP0C875 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 FGD5P1-202ENST00000614866 2498 ntBASIC16.77■□□□□ 0.27
FAM228BP0C875 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.77■□□□□ 0.27
FAM228BP0C875 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.77■□□□□ 0.27
FAM228BP0C875 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.77■□□□□ 0.27
FAM228BP0C875 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
FAM228BP0C875 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.77■□□□□ 0.27
FAM228BP0C875 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.77■□□□□ 0.27
FAM228BP0C875 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
FAM228BP0C875 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FAM228BP0C875 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
FAM228BP0C875 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.76■□□□□ 0.27
FAM228BP0C875 ZBED1P1-201ENST00000502364 1930 ntBASIC16.76■□□□□ 0.27
FAM228BP0C875 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
FAM228BP0C875 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.76■□□□□ 0.27
FAM228BP0C875 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.76■□□□□ 0.27
FAM228BP0C875 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
FAM228BP0C875 AL627223.1-201ENST00000416693 442 ntBASIC16.76■□□□□ 0.27
FAM228BP0C875 KRT18P32-201ENST00000424695 1287 ntBASIC16.76■□□□□ 0.27
FAM228BP0C875 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.76■□□□□ 0.27
FAM228BP0C875 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.76■□□□□ 0.27
FAM228BP0C875 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.76■□□□□ 0.27
FAM228BP0C875 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.76■□□□□ 0.27
FAM228BP0C875 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
FAM228BP0C875 MROH4P-201ENST00000431302 1578 ntBASIC16.76■□□□□ 0.27
FAM228BP0C875 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.76■□□□□ 0.27
FAM228BP0C875 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FAM228BP0C875 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM228BP0C875 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM228BP0C875 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM228BP0C875 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM228BP0C875 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM228BP0C875 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
FAM228BP0C875 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.75■□□□□ 0.27
FAM228BP0C875 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FAM228BP0C875 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms