Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 AC018892.3-201ENST00000623986 2499 ntBASIC17.24■□□□□ 0.35
CLTAP09496 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLTAP09496 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.24■□□□□ 0.35
CLTAP09496 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
CLTAP09496 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 PIN1P1-201ENST00000412108 996 ntBASIC17.24■□□□□ 0.35
CLTAP09496 AC074338.1-201ENST00000416825 156 ntBASIC17.24■□□□□ 0.35
CLTAP09496 GNAQP1-201ENST00000444815 1067 ntBASIC17.24■□□□□ 0.35
CLTAP09496 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.24■□□□□ 0.35
CLTAP09496 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 TIMM17BP1-201ENST00000545713 516 ntBASIC17.24■□□□□ 0.35
CLTAP09496 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.24■□□□□ 0.35
CLTAP09496 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLTAP09496 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.24■□□□□ 0.35
CLTAP09496 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLTAP09496 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CLTAP09496 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 NORAD-201ENST00000565493 5339 ntBASIC17.24■□□□□ 0.35
CLTAP09496 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.24■□□□□ 0.35
CLTAP09496 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLTAP09496 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.24■□□□□ 0.35
CLTAP09496 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 SPDYE19P-201ENST00000338590 713 ntBASIC17.23■□□□□ 0.35
CLTAP09496 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 RPL13P2-201ENST00000440687 659 ntBASIC17.23■□□□□ 0.35
CLTAP09496 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.23■□□□□ 0.35
CLTAP09496 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLTAP09496 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLTAP09496 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.23■□□□□ 0.35
CLTAP09496 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.23■□□□□ 0.35
CLTAP09496 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CLTAP09496 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLTAP09496 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.22■□□□□ 0.35
CLTAP09496 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.22■□□□□ 0.35
CLTAP09496 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLTAP09496 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms