Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
APPP05067 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
APPP05067 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
APPP05067 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
APPP05067 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.9■□□□□ 0.62
APPP05067 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.9■□□□□ 0.62
APPP05067 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
APPP05067 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.9■□□□□ 0.62
APPP05067 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.9■□□□□ 0.62
APPP05067 KRT18P64-201ENST00000434946 1219 ntBASIC18.9■□□□□ 0.62
APPP05067 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.9■□□□□ 0.62
APPP05067 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.9■□□□□ 0.62
APPP05067 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.9■□□□□ 0.62
APPP05067 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.9■□□□□ 0.62
APPP05067 AC004790.1-201ENST00000612686 536 ntBASIC18.9■□□□□ 0.62
APPP05067 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.9■□□□□ 0.62
APPP05067 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.9■□□□□ 0.62
APPP05067 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.9■□□□□ 0.62
APPP05067 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
APPP05067 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.9■□□□□ 0.62
APPP05067 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
APPP05067 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APPP05067 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
APPP05067 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.89■□□□□ 0.62
APPP05067 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
APPP05067 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
APPP05067 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
APPP05067 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.89■□□□□ 0.61
APPP05067 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
APPP05067 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.89■□□□□ 0.61
APPP05067 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.89■□□□□ 0.61
APPP05067 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 TPRX2P-201ENST00000535362 881 ntBASIC18.89■□□□□ 0.61
APPP05067 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
APPP05067 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
APPP05067 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
APPP05067 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.89■□□□□ 0.61
APPP05067 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.89■□□□□ 0.61
APPP05067 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.89■□□□□ 0.61
APPP05067 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
APPP05067 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.89■□□□□ 0.61
APPP05067 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
APPP05067 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
APPP05067 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.89■□□□□ 0.61
APPP05067 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APPP05067 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.88■□□□□ 0.61
APPP05067 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.88■□□□□ 0.61
APPP05067 PIN1P1-201ENST00000412108 996 ntBASIC18.88■□□□□ 0.61
APPP05067 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.88■□□□□ 0.61
APPP05067 RPL13P2-201ENST00000440687 659 ntBASIC18.88■□□□□ 0.61
APPP05067 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
APPP05067 AL132655.2-201ENST00000596276 594 ntBASIC18.88■□□□□ 0.61
APPP05067 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.88■□□□□ 0.61
APPP05067 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.88■□□□□ 0.61
APPP05067 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 CICP13-201ENST00000422015 2789 ntBASIC18.88■□□□□ 0.61
APPP05067 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
APPP05067 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.88■□□□□ 0.61
APPP05067 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APPP05067 AP005117.1-202ENST00000581724 1908 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms