Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHGBP05060 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.79■□□□□ 0.6
CHGBP05060 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
CHGBP05060 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 TMEM14DP-201ENST00000422205 345 ntBASIC18.79■□□□□ 0.6
CHGBP05060 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.79■□□□□ 0.6
CHGBP05060 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.79■□□□□ 0.6
CHGBP05060 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.79■□□□□ 0.6
CHGBP05060 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 AL162727.3-201ENST00000635661 2787 ntBASIC18.79■□□□□ 0.6
CHGBP05060 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 AL391825.1-201ENST00000457671 1364 ntBASIC18.79■□□□□ 0.6
CHGBP05060 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHGBP05060 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHGBP05060 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.79■□□□□ 0.6
CHGBP05060 C18orf15-201ENST00000623680 2534 ntBASIC18.78■□□□□ 0.6
CHGBP05060 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.78■□□□□ 0.6
CHGBP05060 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHGBP05060 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHGBP05060 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.78■□□□□ 0.6
CHGBP05060 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHGBP05060 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.78■□□□□ 0.6
CHGBP05060 AC036164.1-201ENST00000570544 333 ntBASIC18.78■□□□□ 0.6
CHGBP05060 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.78■□□□□ 0.6
CHGBP05060 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.78■□□□□ 0.6
CHGBP05060 AL049840.4-201ENST00000602422 811 ntBASIC18.78■□□□□ 0.6
CHGBP05060 AC025181.2-201ENST00000606994 802 ntBASIC18.78■□□□□ 0.6
CHGBP05060 AC012645.4-201ENST00000610691 1061 ntBASIC18.78■□□□□ 0.6
CHGBP05060 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.78■□□□□ 0.6
CHGBP05060 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.78■□□□□ 0.6
CHGBP05060 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHGBP05060 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.78■□□□□ 0.6
CHGBP05060 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.78■□□□□ 0.6
CHGBP05060 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHGBP05060 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CHGBP05060 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.77■□□□□ 0.6
CHGBP05060 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHGBP05060 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.77■□□□□ 0.6
CHGBP05060 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms