Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.79□□□□□ -0.04
PDGFAP04085 RRP7BP-205ENST00000566851 833 ntBASIC14.79□□□□□ -0.04
PDGFAP04085 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PDGFAP04085 AC010319.3-201ENST00000597028 470 ntBASIC14.79□□□□□ -0.04
PDGFAP04085 AL009178.2-201ENST00000597278 2719 ntBASIC14.79□□□□□ -0.04
PDGFAP04085 AC074044.1-201ENST00000609673 707 ntBASIC14.79□□□□□ -0.04
PDGFAP04085 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PDGFAP04085 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.79□□□□□ -0.04
PDGFAP04085 GGT4P-201ENST00000623672 1708 ntBASIC14.79□□□□□ -0.04
PDGFAP04085 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PDGFAP04085 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PDGFAP04085 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PDGFAP04085 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 AL136982.4-201ENST00000437689 1740 ntBASIC14.78□□□□□ -0.04
PDGFAP04085 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PDGFAP04085 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDGFAP04085 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.78□□□□□ -0.04
PDGFAP04085 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PDGFAP04085 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.78□□□□□ -0.04
PDGFAP04085 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDGFAP04085 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.78□□□□□ -0.04
PDGFAP04085 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.78□□□□□ -0.04
PDGFAP04085 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.78□□□□□ -0.04
PDGFAP04085 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.78□□□□□ -0.04
PDGFAP04085 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PDGFAP04085 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDGFAP04085 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
PDGFAP04085 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.78□□□□□ -0.04
PDGFAP04085 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PDGFAP04085 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDGFAP04085 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.77□□□□□ -0.04
PDGFAP04085 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
PDGFAP04085 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.77□□□□□ -0.04
PDGFAP04085 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PDGFAP04085 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.77□□□□□ -0.04
PDGFAP04085 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDGFAP04085 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.77□□□□□ -0.05
PDGFAP04085 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
PDGFAP04085 SSR1P1-201ENST00000407630 814 ntBASIC14.77□□□□□ -0.05
PDGFAP04085 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.77□□□□□ -0.05
PDGFAP04085 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.77□□□□□ -0.05
PDGFAP04085 USP32P1-208ENST00000506594 1164 ntBASIC14.77□□□□□ -0.05
PDGFAP04085 AC104989.1-201ENST00000519711 778 ntBASIC14.77□□□□□ -0.05
PDGFAP04085 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.77□□□□□ -0.05
PDGFAP04085 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDGFAP04085 RARRES2P5-201ENST00000564013 466 ntBASIC14.77□□□□□ -0.05
PDGFAP04085 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.77□□□□□ -0.05
PDGFAP04085 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.77□□□□□ -0.05
PDGFAP04085 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.77□□□□□ -0.05
PDGFAP04085 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.77□□□□□ -0.05
PDGFAP04085 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.77□□□□□ -0.05
PDGFAP04085 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.77□□□□□ -0.05
PDGFAP04085 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms