Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14□□□□□ -0.17
APOC1P02654 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14□□□□□ -0.17
APOC1P02654 AC134407.2-201ENST00000625089 1978 ntBASIC14□□□□□ -0.17
APOC1P02654 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14□□□□□ -0.17
APOC1P02654 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14□□□□□ -0.17
APOC1P02654 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
APOC1P02654 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC1P02654 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC1P02654 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC1P02654 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC1P02654 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
APOC1P02654 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
APOC1P02654 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
APOC1P02654 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.99□□□□□ -0.17
APOC1P02654 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
APOC1P02654 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.99□□□□□ -0.17
APOC1P02654 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.99□□□□□ -0.17
APOC1P02654 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 AP000842.3-202ENST00000569238 1080 ntBASIC13.99□□□□□ -0.17
APOC1P02654 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC1P02654 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC1P02654 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC1P02654 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.99□□□□□ -0.17
APOC1P02654 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
APOC1P02654 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
APOC1P02654 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.98□□□□□ -0.17
APOC1P02654 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 AC126335.2-201ENST00000623362 4637 ntBASIC13.98□□□□□ -0.17
APOC1P02654 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
APOC1P02654 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 MIR940-201ENST00000401276 94 ntBASIC13.98□□□□□ -0.17
APOC1P02654 RPS8P6-201ENST00000426177 609 ntBASIC13.98□□□□□ -0.17
APOC1P02654 ADH5P3-201ENST00000433842 1137 ntBASIC13.98□□□□□ -0.17
APOC1P02654 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
APOC1P02654 AC079140.1-201ENST00000508039 487 ntBASIC13.98□□□□□ -0.17
APOC1P02654 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.98□□□□□ -0.17
APOC1P02654 AC243562.1-201ENST00000560672 389 ntBASIC13.98□□□□□ -0.17
APOC1P02654 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.98□□□□□ -0.17
APOC1P02654 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.98□□□□□ -0.17
APOC1P02654 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
APOC1P02654 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.98□□□□□ -0.17
APOC1P02654 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms