Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NDUFA1O15239 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 RNU1-129P-201ENST00000384064 167 ntBASIC10.82□□□□□ -0.68
NDUFA1O15239 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.82□□□□□ -0.68
NDUFA1O15239 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 CXCL1P1-201ENST00000502804 216 ntBASIC10.82□□□□□ -0.68
NDUFA1O15239 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.82□□□□□ -0.68
NDUFA1O15239 U1.21-201ENST00000580816 167 ntBASIC10.82□□□□□ -0.68
NDUFA1O15239 AL121912.1-201ENST00000603683 238 ntBASIC10.82□□□□□ -0.68
NDUFA1O15239 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.82□□□□□ -0.68
NDUFA1O15239 AL365330.1-201ENST00000607459 531 ntBASIC10.82□□□□□ -0.68
NDUFA1O15239 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.82□□□□□ -0.68
NDUFA1O15239 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
NDUFA1O15239 AC148477.4-201ENST00000613430 1793 ntBASIC10.82□□□□□ -0.68
NDUFA1O15239 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
NDUFA1O15239 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
NDUFA1O15239 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.82□□□□□ -0.68
NDUFA1O15239 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NDUFA1O15239 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NDUFA1O15239 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NDUFA1O15239 AP002414.3-201ENST00000589352 1468 ntBASIC10.81□□□□□ -0.68
NDUFA1O15239 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
NDUFA1O15239 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
NDUFA1O15239 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NDUFA1O15239 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NDUFA1O15239 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NDUFA1O15239 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NDUFA1O15239 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.81□□□□□ -0.68
NDUFA1O15239 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.81□□□□□ -0.68
NDUFA1O15239 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NDUFA1O15239 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 MED22-202ENST00000371999 987 ntTSL 3 BASIC10.81□□□□□ -0.68
NDUFA1O15239 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
NDUFA1O15239 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.81□□□□□ -0.68
NDUFA1O15239 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NDUFA1O15239 PRSS29P-201ENST00000440800 595 ntBASIC10.81□□□□□ -0.68
NDUFA1O15239 FAM185BP-201ENST00000443595 716 ntBASIC10.81□□□□□ -0.68
NDUFA1O15239 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC10.81□□□□□ -0.68
NDUFA1O15239 AL513480.1-201ENST00000451731 511 ntBASIC10.81□□□□□ -0.68
NDUFA1O15239 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms