Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AHCYP2-201ENST00000430630 1300 ntBASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.84□□□□□ -0.03
CCDC187A0A096LP49 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC187A0A096LP49 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 AC005052.1-201ENST00000625181 2492 ntBASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 BTBD6P1-201ENST00000412176 1267 ntBASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 AC145423.3-201ENST00000615987 467 ntBASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 KRT8P35-201ENST00000483942 1338 ntBASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC187A0A096LP49 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 MIR648-201ENST00000385046 94 ntBASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 AC104306.2-201ENST00000451877 341 ntBASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms