Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.28□□□□□ -0.12
RCE1Q9Y256 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.28□□□□□ -0.12
RCE1Q9Y256 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RCE1Q9Y256 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.27□□□□□ -0.12
RCE1Q9Y256 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 CYP4F24P-201ENST00000586049 1580 ntBASIC14.27□□□□□ -0.12
RCE1Q9Y256 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.27□□□□□ -0.12
RCE1Q9Y256 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RCE1Q9Y256 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RCE1Q9Y256 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 AL139400.1-201ENST00000366220 510 ntBASIC14.27□□□□□ -0.13
RCE1Q9Y256 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.27□□□□□ -0.13
RCE1Q9Y256 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 EEF1DP4-201ENST00000446006 880 ntBASIC14.27□□□□□ -0.13
RCE1Q9Y256 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 AC067863.1-201ENST00000494933 530 ntBASIC14.27□□□□□ -0.13
RCE1Q9Y256 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 AC109322.1-201ENST00000524499 1264 ntBASIC14.27□□□□□ -0.13
RCE1Q9Y256 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RCE1Q9Y256 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
RCE1Q9Y256 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms