Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.06■□□□□ 0.16
EBF1Q9UH73 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EBF1Q9UH73 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 AC093525.8-201ENST00000624099 1342 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 AC245100.3-201ENST00000441281 285 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 CTBP2P5-201ENST00000454986 1264 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 RNA5SP412-201ENST00000516234 123 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 ENPP7P5-201ENST00000541031 1031 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 MIR5189-201ENST00000577370 114 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 MIR6869-201ENST00000619434 62 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 CU634019.7-201ENST00000624153 1185 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 FP236241.2-201ENST00000624906 1185 ntBASIC16.05■□□□□ 0.16
EBF1Q9UH73 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EBF1Q9UH73 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
EBF1Q9UH73 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.04■□□□□ 0.16
EBF1Q9UH73 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 MIR1908-201ENST00000410394 80 ntBASIC16.04■□□□□ 0.16
EBF1Q9UH73 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 AZGP1P1-201ENST00000411909 902 ntBASIC16.04■□□□□ 0.16
EBF1Q9UH73 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 BRI3BPP1-201ENST00000594224 787 ntBASIC16.04■□□□□ 0.16
EBF1Q9UH73 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.04■□□□□ 0.16
EBF1Q9UH73 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
EBF1Q9UH73 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC092364.2-201ENST00000596710 2692 ntBASIC16.03■□□□□ 0.16
EBF1Q9UH73 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms