Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC31.12■■■□□ 2.57
CCDC180Q9P1Z9 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CCDC180Q9P1Z9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC31.12■■■□□ 2.57
CCDC180Q9P1Z9 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
CCDC180Q9P1Z9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC31.12■■■□□ 2.57
CCDC180Q9P1Z9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC180Q9P1Z9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 AL138725.1-201ENST00000407347 1314 ntBASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 AC239868.1-201ENST00000369385 493 ntBASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 AC007718.1-201ENST00000621078 280 ntBASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC180Q9P1Z9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 RPL5P21-201ENST00000404620 815 ntBASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 FAM90A2P-201ENST00000511144 1395 ntBASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 FAM90A25P-201ENST00000528404 1395 ntBASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC180Q9P1Z9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 ALG3P1-201ENST00000508806 1114 ntBASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 AC008805.1-201ENST00000590892 364 ntBASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 AC005618.3-201ENST00000624928 458 ntBASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC180Q9P1Z9 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 PHBP15-201ENST00000574228 665 ntBASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CCDC180Q9P1Z9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 CYP51A1P3-201ENST00000400072 1428 ntBASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 INE2-201ENST00000630399 1874 ntBASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC31.07■■■□□ 2.56
CCDC180Q9P1Z9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms