Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 PIN1P1-201ENST00000412108 996 ntBASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 TARDBPP1-201ENST00000442013 1203 ntBASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 SPDYE18-201ENST00000510091 1050 ntBASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 SRD5A3P1-201ENST00000603021 949 ntBASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 AC063926.3-201ENST00000624734 5658 ntBASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 SPDYE19P-201ENST00000338590 713 ntBASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 AC136604.1-201ENST00000418535 575 ntBASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 HNRNPUP1-201ENST00000554987 333 ntBASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 AC092337.1-201ENST00000568699 1129 ntBASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 AC068587.6-202ENST00000641839 5619 ntBASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 AC018892.3-201ENST00000623986 2499 ntBASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM106BQ9NUM4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM106BQ9NUM4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM106BQ9NUM4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TMEM106BQ9NUM4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms