Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 AC104989.1-201ENST00000519711 778 ntBASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 PTP4A1P2-201ENST00000546033 454 ntBASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 AC233724.13-201ENST00000598383 410 ntBASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KIAA1549Q9HCM3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AC012441.1-201ENST00000446669 685 ntBASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AC005229.1-201ENST00000392885 409 ntBASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 COX11-210ENST00000639671 696 ntBASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
KIAA1549Q9HCM3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms