Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ATP5G2P1-201ENST00000433580 426 ntBASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 SCARNA2-201ENST00000458748 420 ntBASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 RPS15P9-201ENST00000494093 319 ntBASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 FOSL1P1-201ENST00000511041 816 ntBASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SND1-IT1Q9HBX3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 LAGE3P1-201ENST00000425356 484 ntBASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 MTRF1LP2-201ENST00000506027 1122 ntBASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 AC008608.2-201ENST00000606089 416 ntBASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 AC021097.1-201ENST00000607902 574 ntBASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SND1-IT1Q9HBX3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms