Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM1Q9HBL6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AZGP1P1-201ENST00000411909 902 ntBASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AL353705.2-201ENST00000428243 662 ntBASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AC005237.2-201ENST00000434368 219 ntBASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AC105339.1-204ENST00000636249 355 ntBASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 ELL2P1-201ENST00000413990 1906 ntBASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 AC099063.4-201ENST00000641099 1602 ntBASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LRTM1Q9HBL6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 AC136604.1-201ENST00000418535 575 ntBASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 CEND1P1-201ENST00000451006 455 ntBASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 AC022145.2-201ENST00000598203 171 ntBASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 MST1L-201ENST00000442552 2185 ntBASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms