Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 AC092474.2-201ENST00000424288 719 ntBASIC13.82□□□□□ -0.2
ELL3Q9HB65 AC140658.5-201ENST00000438532 169 ntBASIC13.82□□□□□ -0.2
ELL3Q9HB65 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 ALG1L5P-201ENST00000482043 771 ntBASIC13.82□□□□□ -0.2
ELL3Q9HB65 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 AC091812.2-201ENST00000619081 385 ntBASIC13.82□□□□□ -0.2
ELL3Q9HB65 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 LINC02228-204ENST00000642115 2962 ntBASIC13.82□□□□□ -0.2
ELL3Q9HB65 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ELL3Q9HB65 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ELL3Q9HB65 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 SSR4P1-203ENST00000599569 2260 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 AC087481.3-201ENST00000602886 1894 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 YBX2P1-201ENST00000394192 760 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 PRYP6-201ENST00000514804 343 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 AC092865.5-201ENST00000545435 363 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 AP002472.1-201ENST00000577490 586 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 AC010327.4-202ENST00000591484 748 ntBASIC13.81□□□□□ -0.2
ELL3Q9HB65 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.81□□□□□ -0.2
ELL3Q9HB65 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ELL3Q9HB65 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms