Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NKX6-2Q9C056 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX6-2Q9C056 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX6-2Q9C056 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX6-2Q9C056 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AC019294.4-201ENST00000561777 2905 ntBASIC12.82□□□□□ -0.36
NKX6-2Q9C056 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 MST1P2-201ENST00000457982 2291 ntBASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NKX6-2Q9C056 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AC131902.2-201ENST00000566892 2172 ntBASIC12.81□□□□□ -0.36
NKX6-2Q9C056 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.81□□□□□ -0.36
NKX6-2Q9C056 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AC246785.2-201ENST00000432512 513 ntBASIC12.81□□□□□ -0.36
NKX6-2Q9C056 ATP5G1P1-201ENST00000448724 379 ntBASIC12.81□□□□□ -0.36
NKX6-2Q9C056 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 RN7SL606P-201ENST00000472779 293 ntBASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AC090616.6-201ENST00000582640 721 ntBASIC12.81□□□□□ -0.36
NKX6-2Q9C056 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.81□□□□□ -0.36
NKX6-2Q9C056 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms