Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 CNN2P8-201ENST00000421872 913 ntBASIC15.96■□□□□ 0.15
PHOX2BQ99453 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 AC061975.2-201ENST00000581722 295 ntBASIC15.96■□□□□ 0.15
PHOX2BQ99453 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.96■□□□□ 0.15
PHOX2BQ99453 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PHOX2BQ99453 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.96■□□□□ 0.14
PHOX2BQ99453 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PHOX2BQ99453 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PHOX2BQ99453 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PHOX2BQ99453 AC092053.1-201ENST00000605787 1936 ntBASIC15.96■□□□□ 0.14
PHOX2BQ99453 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 MIR1227-201ENST00000408484 88 ntBASIC15.95■□□□□ 0.14
PHOX2BQ99453 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 SPTLC1P5-201ENST00000450718 252 ntBASIC15.95■□□□□ 0.14
PHOX2BQ99453 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 RN7SL440P-201ENST00000577855 343 ntBASIC15.95■□□□□ 0.14
PHOX2BQ99453 RN7SL736P-201ENST00000613111 269 ntBASIC15.95■□□□□ 0.14
PHOX2BQ99453 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 AL136301.1-201ENST00000615830 422 ntBASIC15.95■□□□□ 0.14
PHOX2BQ99453 AC103798.2-201ENST00000624292 632 ntBASIC15.95■□□□□ 0.14
PHOX2BQ99453 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PHOX2BQ99453 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PHOX2BQ99453 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHOX2BQ99453 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHOX2BQ99453 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHOX2BQ99453 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PHOX2BQ99453 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHOX2BQ99453 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHOX2BQ99453 LINC00554-201ENST00000564841 3011 ntBASIC15.94■□□□□ 0.14
PHOX2BQ99453 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PHOX2BQ99453 AC093433.1-201ENST00000458048 571 ntBASIC15.94■□□□□ 0.14
PHOX2BQ99453 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 FAM86LP-201ENST00000478302 853 ntBASIC15.94■□□□□ 0.14
PHOX2BQ99453 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 AC006518.1-201ENST00000541449 943 ntBASIC15.94■□□□□ 0.14
PHOX2BQ99453 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.94■□□□□ 0.14
PHOX2BQ99453 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms