Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 DNAJB3-202ENST00000449667 1266 ntBASIC14.98□□□□□ -0.01
BBS4Q96RK4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 BANF1P1-201ENST00000553684 263 ntBASIC14.98□□□□□ -0.01
BBS4Q96RK4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 AC073347.1-201ENST00000421633 2643 ntBASIC14.98□□□□□ -0.01
BBS4Q96RK4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 AC092384.3-202ENST00000564646 2873 ntBASIC14.97□□□□□ -0.01
BBS4Q96RK4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.97□□□□□ -0.01
BBS4Q96RK4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 AL691403.2-201ENST00000618460 490 ntBASIC14.97□□□□□ -0.01
BBS4Q96RK4 LINC00628-201ENST00000628516 1289 ntBASIC14.97□□□□□ -0.01
BBS4Q96RK4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 OR2I1P-210ENST00000642037 4691 ntBASIC14.97□□□□□ -0.01
BBS4Q96RK4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.97□□□□□ -0.01
BBS4Q96RK4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BBS4Q96RK4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.96□□□□□ -0.01
BBS4Q96RK4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
BBS4Q96RK4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.96□□□□□ -0.01
BBS4Q96RK4 SSR4P1-203ENST00000599569 2260 ntBASIC14.96□□□□□ -0.01
BBS4Q96RK4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BBS4Q96RK4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
BBS4Q96RK4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
BBS4Q96RK4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.96□□□□□ -0.01
BBS4Q96RK4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BBS4Q96RK4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms