Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 SERBP1P3-201ENST00000459980 809 ntBASIC16.67■□□□□ 0.26
TRIM11Q96F44 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 AL512356.2-201ENST00000546955 174 ntBASIC16.67■□□□□ 0.26
TRIM11Q96F44 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM11Q96F44 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM11Q96F44 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.66■□□□□ 0.26
TRIM11Q96F44 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 AP006288.1-201ENST00000446065 395 ntBASIC16.66■□□□□ 0.26
TRIM11Q96F44 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 AL079307.3-201ENST00000556114 283 ntBASIC16.66■□□□□ 0.26
TRIM11Q96F44 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 MIR4453-201ENST00000584019 89 ntBASIC16.66■□□□□ 0.26
TRIM11Q96F44 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM11Q96F44 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRIM11Q96F44 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 CETN4P-206ENST00000642099 2168 ntBASIC16.65■□□□□ 0.26
TRIM11Q96F44 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM11Q96F44 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM11Q96F44 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms