Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 RNF165-205ENST00000588679 2904 ntBASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAPGEF4Q8WZA2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC092364.2-201ENST00000596710 2692 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 CROCCP1-201ENST00000426910 5675 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 NUS1P3-201ENST00000423502 862 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 RPSAP36-202ENST00000494591 1261 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 RN7SL48P-201ENST00000579283 293 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC104982.3-201ENST00000581995 514 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC015818.8-201ENST00000587907 1519 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 AC124067.4-201ENST00000519691 2379 ntBASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAPGEF4Q8WZA2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 TPM3P8-201ENST00000330554 643 ntBASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 AP006547.1-201ENST00000563435 692 ntBASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 AC244452.3-201ENST00000636814 210 ntBASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 AL354989.2-201ENST00000435838 1540 ntBASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAPGEF4Q8WZA2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.4■□□□□ 0.86
RAPGEF4Q8WZA2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms