Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 AC144522.1-201ENST00000625111 1658 ntBASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 ETV2-207ENST00000619399 994 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
ALMS1Q8TCU4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 RNF146-211ENST00000609447 607 ntTSL 4 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AC138466.4-201ENST00000623965 852 ntBASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AL157791.1-201ENST00000553667 1699 ntBASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 RPL8P2-201ENST00000430538 502 ntBASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 MME-218ENST00000625667 363 ntTSL 5 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AL139384.1-201ENST00000612143 3047 ntBASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 AC124067.4-201ENST00000519691 2379 ntBASIC10.3□□□□□ -0.76
ALMS1Q8TCU4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC078875.1-201ENST00000431907 724 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ALG1L13P-202ENST00000519320 584 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC011477.6-201ENST00000604980 1927 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 PIN4P1-201ENST00000451079 396 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 SCARNA21-201ENST00000517026 139 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 C2orf69P1-201ENST00000563532 1093 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 AL138725.1-201ENST00000407347 1314 ntBASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.29□□□□□ -0.76
ALMS1Q8TCU4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms