Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHKBP1Q8TBC3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AC018665.1-201ENST00000622927 1362 ntBASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AC136604.1-201ENST00000418535 575 ntBASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 KRT223P-202ENST00000449164 1292 ntBASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 MIR5189-201ENST00000577370 114 ntBASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AL450472.2-201ENST00000603663 1156 ntBASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 MIR6799-201ENST00000620297 69 ntBASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHKBP1Q8TBC3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 SLC25A47P1-201ENST00000531577 414 ntBASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 AP005482.1-201ENST00000563722 1273 ntBASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 AC233724.13-201ENST00000598383 410 ntBASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 AC133552.6-201ENST00000613406 534 ntBASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms