Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.69□□□□□ -0.22
BEST4Q8NFU0 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 AC140479.7-201ENST00000636301 2332 ntBASIC13.69□□□□□ -0.22
BEST4Q8NFU0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
BEST4Q8NFU0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 AC008608.2-201ENST00000606089 416 ntBASIC13.68□□□□□ -0.22
BEST4Q8NFU0 AC021097.1-201ENST00000607902 574 ntBASIC13.68□□□□□ -0.22
BEST4Q8NFU0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.68□□□□□ -0.22
BEST4Q8NFU0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.68□□□□□ -0.22
BEST4Q8NFU0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 AC009090.5-201ENST00000624886 2285 ntBASIC13.67□□□□□ -0.22
BEST4Q8NFU0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BEST4Q8NFU0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms