Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 KRT18P28-201ENST00000453838 1332 ntBASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 AC022532.1-201ENST00000624563 1728 ntBASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC116Q8IYX3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 KLF2P3-201ENST00000451977 1087 ntBASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 AC126177.1-201ENST00000547829 2218 ntBASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCDC116Q8IYX3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC136604.1-201ENST00000418535 575 ntBASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 METTL21AP1-201ENST00000438852 635 ntBASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 AL138828.2-201ENST00000615812 383 ntBASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 MIR6069-201ENST00000620069 79 ntBASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC116Q8IYX3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms