Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC83Q8IWF9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC83Q8IWF9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AC023024.2-201ENST00000623561 1993 ntBASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AC148477.4-201ENST00000613430 1793 ntBASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 HIST3H2BA-201ENST00000436555 524 ntBASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AC026150.2-201ENST00000564693 1156 ntBASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC83Q8IWF9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AC126365.1-201ENST00000578585 1514 ntBASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 RPSAP43-201ENST00000402237 625 ntBASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AL645939.2-201ENST00000427340 991 ntBASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AL133215.2-201ENST00000609242 977 ntBASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AC063926.3-201ENST00000624734 5658 ntBASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AGAP7P-201ENST00000582299 2062 ntBASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 AGAP14-201ENST00000624701 2060 ntBASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC83Q8IWF9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC83Q8IWF9 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms