Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF44Q7L0R7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 SPDYE19P-201ENST00000338590 713 ntBASIC15.11■□□□□ 0.01
RNF44Q7L0R7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC015922.1-201ENST00000421102 1152 ntBASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC093004.1-201ENST00000508850 424 ntBASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 TIMM17BP1-201ENST00000545713 516 ntBASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AC004233.3-201ENST00000607794 1269 ntBASIC15.11■□□□□ 0.01
RNF44Q7L0R7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF44Q7L0R7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF44Q7L0R7 GNAQP1-201ENST00000444815 1067 ntBASIC15.1■□□□□ 0.01
RNF44Q7L0R7 MEIS3P1-201ENST00000495167 958 ntBASIC15.1■□□□□ 0.01
RNF44Q7L0R7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms