Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 CICP8-201ENST00000455800 2813 ntBASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 ACTG1P14-201ENST00000446382 1122 ntBASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 CXCL1P1-201ENST00000502804 216 ntBASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXR1Q6PIV2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXR1Q6PIV2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 AL139400.1-201ENST00000366220 510 ntBASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 RHOQP3-201ENST00000437982 621 ntBASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 AC068137.2-201ENST00000605408 478 ntBASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.51■□□□□ 0.23
FOXR1Q6PIV2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 AL122018.1-201ENST00000446607 2310 ntBASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXR1Q6PIV2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms