Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.86■□□□□ 0.61
RFX7Q2KHR2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFX7Q2KHR2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 AL033527.4-201ENST00000641026 673 ntBASIC18.85■□□□□ 0.61
RFX7Q2KHR2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 PAUPAR-201ENST00000630360 2965 ntBASIC18.85■□□□□ 0.61
RFX7Q2KHR2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.85■□□□□ 0.61
RFX7Q2KHR2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 AC104457.1-201ENST00000401024 814 ntBASIC18.84■□□□□ 0.61
RFX7Q2KHR2 AL359711.2-201ENST00000563105 872 ntBASIC18.84■□□□□ 0.61
RFX7Q2KHR2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 AC233724.13-201ENST00000598383 410 ntBASIC18.84■□□□□ 0.61
RFX7Q2KHR2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 C18orf15-201ENST00000623680 2534 ntBASIC18.84■□□□□ 0.61
RFX7Q2KHR2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 AC018665.1-201ENST00000622927 1362 ntBASIC18.84■□□□□ 0.61
RFX7Q2KHR2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFX7Q2KHR2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 GHSR-202ENST00000427970 912 ntBASIC18.83■□□□□ 0.61
RFX7Q2KHR2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 AC234783.1-201ENST00000441761 496 ntBASIC18.83■□□□□ 0.61
RFX7Q2KHR2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.83■□□□□ 0.61
RFX7Q2KHR2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms