Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CXCR4P61073 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCR4P61073 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 REXO1L1P-202ENST00000608646 1974 ntBASIC14.4□□□□□ -0.1
CXCR4P61073 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCR4P61073 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CXCR4P61073 AL161772.1-201ENST00000610494 4412 ntBASIC14.39□□□□□ -0.11
CXCR4P61073 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CXCR4P61073 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 AF186996.4-201ENST00000467186 377 ntBASIC14.39□□□□□ -0.11
CXCR4P61073 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CXCR4P61073 AC117500.6-201ENST00000624871 588 ntBASIC14.39□□□□□ -0.11
CXCR4P61073 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCR4P61073 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CXCR4P61073 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCR4P61073 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 AC027601.5-201ENST00000624065 2482 ntBASIC14.38□□□□□ -0.11
CXCR4P61073 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CXCR4P61073 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCR4P61073 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.38□□□□□ -0.11
CXCR4P61073 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.38□□□□□ -0.11
CXCR4P61073 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCR4P61073 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCR4P61073 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.38□□□□□ -0.11
CXCR4P61073 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CXCR4P61073 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCR4P61073 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCR4P61073 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.38□□□□□ -0.11
CXCR4P61073 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCR4P61073 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms