Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 HYMAI.1-201ENST00000620949 238 ntBASIC12.34□□□□□ -0.43
ERVFC1-1P60608 AC124864.1-201ENST00000623408 392 ntBASIC12.34□□□□□ -0.43
ERVFC1-1P60608 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 AC105250.1-201ENST00000509378 2057 ntBASIC12.34□□□□□ -0.43
ERVFC1-1P60608 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 AC005622.1-201ENST00000636801 1703 ntBASIC12.34□□□□□ -0.43
ERVFC1-1P60608 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ERVFC1-1P60608 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
ERVFC1-1P60608 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ERVFC1-1P60608 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.43
ERVFC1-1P60608 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 AC073869.1-201ENST00000415574 2762 ntBASIC12.33□□□□□ -0.44
ERVFC1-1P60608 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.33□□□□□ -0.44
ERVFC1-1P60608 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ERVFC1-1P60608 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ERVFC1-1P60608 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms